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scHPL documentation
scHPL documentation

Main

  • scHPL
  • Installation
  • API
    • Learn hierarchy
    • Train hierarchical classifier
    • Predict labels
    • Evaluate performance
    • Useful functions
  • A few tips for using scHPL

Examples

  • Basic tutorial
  • treeArches: learning and updating a cell-type hierarchy (basic tutorial)
  • treeArches: identifying new cell types (advanced tutorial)
  • AMB inter-dataset
  • Brain inter-dataset
  • PBMC inter-dataset
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